BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D05LP1|AL425849
(801 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig998 1567 0.0
>3x_Contig998
Length = 4885
Score = 1567 bits (789), Expect = 0.0
Identities = 797/801 (99%)
Strand = Plus / Minus
Query: 1 gtccttgcattcaacacatattacagtattgtacttctaaaaagaggctttatatgacca 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2556 gtccttgcattcaacacatattacagaattgtacttctaaaaagaggctttatatgacca 2497
Query: 61 tcwtaatactgatagaggcttgaataagaggctcagattactggataaagctctacaata 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2496 tcaaaatactgatagaggcttgaataagaggctcagattactggataaagctctacaata 2437
Query: 121 gtccctttgggactttgtatgaatttttgtaaattctatttaagagaaaaatccagaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2436 gtccctttgggactttgtatgaatttttgtaaattctatttaagagaaaaatccagaaag 2377
Query: 181 atgtttatatattacaaaaccttcattcagtttgcattttaagttgcttaatcacttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2376 atgtttatatattacaaaaccttcattcagtttgcattttaagttgcttaatcacttcat 2317
Query: 241 gcaaaatcgaaatcagtacccttattcgtcgtcttcgtcatccaacacagctatctttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2316 gcaaaatcgaaatcagtacccttattcgtcgtcttcgtcatccaacacagctatctttct 2257
Query: 301 tttcttggcttgtgcatcctcctgatattcttgcgcacctgtttgtttaacttcccttag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2256 tttcttggcttgtgcatcctcctgatattcttgcgcacctgtttgtttaacttcccttag 2197
Query: 361 tcttttagcattttcgtattctttctcagagtcaccaccatccgattcttcttcgtctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2196 tcttttagcattttcgtattctttctcagagtcaccaccatccgattcttcttcgtctcc 2137
Query: 421 gacatcattgtcttctcctgagaaatcctcatcttcctcttcttcttcatcatcttcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2136 gacatcattgtcttctcctgagaaatcctcatcttcctcttcttcttcatcatcttcttc 2077
Query: 481 ttcgtcatcctgtgcaacgaagccgtcatcatattcgtattcgtctaagttatgacgttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2076 ttcgtcatcctgtgcaacgaagccgtcatcatattcgtattcgtctaagttatgacgttt 2017
Query: 541 tgataagttcttttgtatattgaattgaggttctggagaatcacctgcattttctagttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2016 tgataagttcttttgtatattgaattgaggttctggagaatcacctgcattttctagttc 1957
Query: 601 aagtttctccttcaattgtttctttcttctctctctcaatatttgakcgtgcttcttttc 660
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1956 aagtttctccttcaattgtttctttcttctctctctcaatatttgatcgtgcttcttttc 1897
Query: 661 taactctctcttctcgagttcaggatctgtgcgtgtgatatacgtgtttggaccatgttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1896 taactctctcttctcgagttcaggatctgtgcgtgtgatatacgtgtttggaccatgttg 1837
Query: 721 ccctctttcatctcttctagcaacagctttgcttaggattttatgcacctttgaattggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1836 ccctctttcatctcttctagcaacagctttgcttaggattttatgcacctttgaattggt 1777
Query: 781 ggatgttggtacaaacatcat 801
|||||||||||||||||||||
Sbjct: 1776 ggatgttggtacaaacatcat 1756
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9301
Number of Sequences: 1807
Number of extensions: 9301
Number of successful extensions: 372
Number of sequences better than 1.0e-20: 1
length of query: 801
length of database: 10,358,551
effective HSP length: 16
effective length of query: 785
effective length of database: 10,329,639
effective search space: 8108766615
effective search space used: 8108766615
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)